BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E02SP1|AL430057
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig357 1540 0.0
>3x_Contig357
Length = 1454
Score = 1540 bits (774), Expect = 0.0
Identities = 799/808 (98%), Gaps = 2/808 (0%)
Strand = Plus / Minus
Query: 1 caaatctaaactaataaaaagcctggtaagtaaggactcctgttgtagttgaagaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 caaatctaaactaataaaaagcctggtaagtaaggactcctgttgtagttgaagaacaaa 747
Query: 61 ttcatcaatgctatcttccgttatcaagcattcaacggatatagtatcgagaacagtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttcatcaatgctatcttccgttatcaagcattcaacggatatagtatcgagaacagtctt 687
Query: 121 aaaaacagcatttgcaattgtttggtcagaatgtgctgtagttggtattgtaactttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaaaacagcatttgcaattgtttggtcagaatgtgctgtagttggtattgtaactttttg 627
Query: 181 atcaacaattagactctgtgatagaaaatctgaatttgataatagagttatatatgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 626 atcaacaattagactctgtgatagaaaatctgaatttgataatagagttatatat-cttc 568
Query: 241 gcttgtttctggratttcggtgcaataatctttaaatgccttgacatgaccttgcttctt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcttgtttctggaatttcggtgcaataatctttaaatgccttgacatgaccttgcttctt 508
Query: 301 agaagcttcatataacctgagtagaagagaaccgtttagtatttttgatttgaaaataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agaagcttcatataacctgagtagaagagaaccgtttagtatttttgatttgaaaataga 448
Query: 361 atcatcatcaaactgataagtggrgacaaaatcttcggtgaaatccttgtaggattgact 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcatcatcaaactgataagtggagacaaaatcttcggtgaaatccttgtaggattgact 388
Query: 421 tgaatgcatgagttttgagagavattcactattcaagcgagccaaaaacgaaggaattgc 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgaatgcatgagttttgagagaaattcactattcaagcgagccaaaaacgaaggaattgc 328
Query: 481 cttctttggtgtttcatattgggataaaaccattataaaatcgtcaaaatactgttccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttctttggtgtttcatattgggataaaaccattataaaatcgtcaaaatactgttccca 268
Query: 541 agtagaattcgctaagaatgcagagtttgavaaatctatcatcacatccattggratttt 600
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 267 agtagaattcgctaagaatgcagagtttgaaaaatctatcatcacatccattggaatttt 208
Query: 601 gaagaaagcctcagagactaacgtgggtgatacgtcgataaaagtattaatctctttggt 660
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 207 gaagaaagcctcagagactaacgtgggtaatacgtcgataaaagtattaatctctttggt 148
Query: 661 aaggttcaagttattggttttgatcaagttatcgtagaaaatgaagccataacaagaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aaggttcaagttattggttttgatcaagttatcgtagaaaatgaagccataacaagaagg 88
Query: 721 aagatcgtcaggattttccaactcctccaaagatttcataacttcaacgctcaacatatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 aagatcgtcaggattttccaactcctccaaagatttcataacttcaacgctcaacatatg 28
Query: 781 catagttgtgatatcactggacaaaatg 808
||||||||| |||||||| |||||||||
Sbjct: 27 catagttgt-atatcactagacaaaatg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7861
Number of Sequences: 1807
Number of extensions: 7861
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)